Josh M. London's repositories
trophic-sars
a place and space for discussion among the AFSC Openscapes teams focussed on trophic roles of ice seals and marine mammal stock assessment reports -- but ALL are welcome!
isec2022-tidy-movt-modeling
repository supporting the ISEC 2022 workshop 'Tidy Data Manipulation and Animal Movement Modeling in R'
ctmm-funcs
initial set of functions and demo scripts for using `ctmm` with marine animal data
across-180-and-back
discussions and lessons related to the challenges of spatial analysis and mapping in R when the area of interest crosses 180 degrees longitude
bering-strait-science
presentation materials for the 2022 Bering Strait Science talk
compendium
repository template for typical research compendium
dolphin_isotopes
This repository provides R code used for portions of the stable isotope analysis in McCluskey et al 2020
eSDM
A user-friendly spatial tool with a web-based interface that allows users to import SDM layers and create and explore ensemble predictions to inform management and explore spatial uncertainties
GitHub-Guide
GitHub Guide developed by NMFS Open Science
glmmLDTS
generalized linear mixed models for massive data sets of continuous time series data
jmlondon.r-universe.dev
r-universe repository
nmfs-rug-targets
slide deck for presentation to the NMFS R User Group about the {targets} package
nmfs_rsconnect
Dockerfile to mirror the NMFS RStudio::Connect server
NMFSReports
Write smart R Markdown reports with these basic and easy funcitons!
pagedown-cv
Templates for generating a CV with R Markdown + entries in a spreadsheet
Resources
Resources for model and software development
scico
Palettes for R based on the Scientific Colour-Maps
stringb
A dependency-free version of stringr
trackdown-playground
playground for testing and exploring the trackdown package and workflows
xaringan-nmfs
xaringan theme with NMFS branding