Juan M. Bello-Rivas's repositories
diffusion-maps
Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps
maxima-interface
Simple interface between Common Lisp and Maxima. Moved to https://git.sr.ht/~jmbr/maxima-interface
cl-buchberger
Buchberger's algorithm in Common Lisp. Moved to https://git.sr.ht/~jmbr/cl-buchberger
laplace-beltrami-eigensolver
Calculates the eigendecomposition of the Laplace-Beltrami operator on charts of Riemannian manifolds. Moved to https://git.sr.ht/~jmbr/laplace-beltrami-eigensolver
go-replicants
Molecular simulator for proteins that uses Go-type potentials
baoab-constraints
Code for numerical experiments using Langevin Dynamics with constraints
eigensolver
Library for computing eigenvectors of large sparse matrices using ARPACK and SuiteSparse
sbcl-notes
Notes written while working my way through the sources of SBCL.
colvars-gaussian-processes
Use Gaussian processes as collective variables in molecular simulations with NAMD. Moved to https://git.sr.ht/~jmbr/colvars-gaussian-processes
gentlest_ascent_dynamics_on_manifolds
Gentlest ascent dynamics on manifolds
inferior-maple-mode
Simple Maple command-line interface for Emacs
lambda-dynamics-quadrature
Model system for validating lambda dynamics implementations. Moved to https://git.sr.ht/~jmbr/lambda-dynamics-quadrature
latex2anki
Convert decks of flashcards written in LaTeX to Anki. Moved to https://git.sr.ht/~jmbr/latex2anki
make-project
Boilerplate generator for Common Lisp projects
regex-trace
Trace macro with regular expression support
school-on-molecular-kinetics
Jupyter notebooks prepared for the CECAM School on Molecular Kinetics in Lausanne, Switzerland (August 2016)
simple-milestoning
Simple example of Milestoning