jltsiren

Jouni Siren's repositories

BWT-based index for graphs

Language:C++MIT70 14 24

Substring index for paths in a graph

Language:C++MIT57 9 3

Simple succinct data structures (in Rust)

Language:RustMIT44 10 6

GBWT in Rust

Language:RustMIT34 5 1

A tool for merging large BWTs

Language:C++MIT26 6 3

GBWT-based handle graph

Language:C++MIT26 5 2

Relative data structures based on the BWT

Language:C++MIT12 80

Prototype for an immutable pangenome graph in SQLite

Language:RustMIT2 20

tools for working with genome variation graphs

Language:C++NOASSERTION1 20

A C++ API to read and write kff files

Language:C++AGPL-3.0010