jlorsal's repositories
genome-data-integration
Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls
monkeypox
Monkeypox public repository
one-liners
Frequently used commands in Bioinformatics
prepABEL
BASH scripting to prepare ProbABEL (a software to do survival analysis with dosage data) input files, -Genomic Predictor, INFO, and MAP- from dosage and info VCF files from Michigan Imputation Server
ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
relecov-platform
Fork of relecov-platform from the BU-ISCIII
relecov-tools
set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.
VCF-descriptions
Description of VCF fields for different variant-callers
viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples