Johannes lab (jlab-code)

Johannes lab

jlab-code

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Plant Epigenomics

Location:Technical University of Munich

Home Page:www.johanneslab.org

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Johannes lab's repositories

MethylStar

A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.

Language:PythonLicense:GPL-3.0Stargazers:30Issues:2Issues:18

AlphaBeta

Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

Language:RLicense:GPL-3.0Stargazers:10Issues:2Issues:1
Language:RStargazers:1Issues:0Issues:0

gbMine

Automatic detection of gene body methylated genes in plant genomes

Language:PythonStargazers:0Issues:0Issues:0
Language:Jupyter NotebookStargazers:0Issues:0Issues:0

jDMRgrid

jDMRgrid: a heuristic DMR caller for WGBS data using grid approach

Language:RStargazers:0Issues:0Issues:0
License:GPL-2.0Stargazers:0Issues:0Issues:0
Language:RStargazers:0Issues:0Issues:0