jjborrelli

trophic

An R package for simulating food webs

forecast-lake-george

Setting up a workflow to generate automated near-term forecasts of weather, water quality, and the food web of Lake George NY

MetabolicMicrobe

Functions associated with metabolic modeling of microbial communities

rend

An R package for Ecological Network Dynamics

2016-02-05-nyas-swc-r

2018-10-22-Stonybrook-IACS-R

adklakes

citationNetwork

DepthProfileR

ecological-stability

What does it mean for an ecological community to be stable? A review manuscript in progress.

ecoprimer

enviroFW

Investigating how environmental variation impacts food web dynamics

foodwebmodel

A food web model of the aquatic species of the Lake George, NY, USA. The model comprehends plankton, snails and fish

fw_dyn

human-microbiome

analyzing the data from the Human Microbiome Project

inferints

interaction-motifs

invader

jjborrelli-website

My personal website and blog

jjborrelli.github.io

microbial-dyn

NEON-forecast-challenge-workshop

nullmatR

Generate binary matrices based on a suite of null models

Population-Ecology

rKeystone

Looking for what makes keystone species keystones

SpiecEasi

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

subgraph-scale-up

trophicLake

A spatially explicit predator prey model exploring the impact of lake shape and properties on dynamics

vacancy-chain

web-compendium

A compendium of data about ecological networks