The ECOSYS model for terrestrial ecosystem biogeochemistry
The code is developed by Professor Robert Grant at University of Alberta.
Jinyun Tang (jinyuntang@lbl.gov) helps maintaining the code on github.
git clone https://github.com/jinyun1tang/ECOSYS.git
You can also make a fork using the fork button on the upper right corner.
- clean the build folder
make distclean
- Configure for building
make config CC=icc CXX=icpc FC=ifort
- If using gnu compilers, type
make config CC=gcc CXX=g++ FC=gfortran
- Obtain the executable
make install CC=icc CXX=icpc FC=ifort
- The executable is located in
./local/bin/ecosys.x
- suppose you are in the directory examples/sample_run/, cp the executable and do
./ecosys.x < runscript_test
- and then check output in examples/sample_run/outputs
git log --graph
will give you a history of the commits.
git status
will list files that are currently tracked or not tracked by git.
git checkout -b your_branch
will make you a branch with name "your_branch"
git push -u origin "your_branch"
will push your branch to remote for the first time.
You can also create a new branch using the github web tools.
git add files_you_changed
will add the "files_you_changed" to the tracking list.
git commit
will ask you to write a message about what you've done and what you want to others know about (why) the changes are made.
git push origin "your_branch"
will push your changes to your branch.
will do fast forward merge in case your local branch is not synchronized with your remote branch and the two branches have no conflicts.
git stash
will foget all your changes made in local directory.
git diff
will list your changes that made the code different from the remote.