jinhao94's repositories

hybrid_script

Script for hybrid

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Learning-about-Snakemake

Learning about snakemake, many many test... Hope everything goes well, fewer bugs and more happiness...

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binning_script

A integrated binning pipeline

Heatmap_practice

Pipeline or R demo

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NextPolish

Fast and accurately polish the genome generated by long reads.

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PNPS

The method for calculating the PN/PS ratio

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dnds

Calculate dN/dS ratio precisely (Ka/Ks) using a codon-by-codon counting method.

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EnrichedHeatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.

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galah

More scalable dereplication for metagenome assembled genomes

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generate-databases

Scripts to generate the databases for antiSMASH's ClusterBlast and KnownClusterBlast.

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iLABdb

The analysis flow of iLABdb

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Jin-learning

日常学习

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long-sea-voyage-program

Probiotics maintain the sailors’ intestinal microbiome homeostasis during a long sea voyage

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nanopore_script

A snakemake assembly pipeline for hybrid metagenome sequencing

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