jing-wan

DeepSTARR

Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Drosophila melanogaster S2 cells

Epromoter_GWAS

gganatogram

Create anatograms using ggplot2

ggplot2

An implementation of the Grammar of Graphics in R

git-tips

:trollface:Git的奇技淫巧

Hi-C-heatmap

HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

iSTARR-seq_data_analysis

computational code for iSTARR-seq paper

karyoploteR

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

MatchedFilter

Prediction of Active Enhancers and Promoters in a Cell type specific manner using shape matching of histone and/or DNase-I hypersensitivity profiles

pymc4c

A python based approach to processing MC4C data

Python-100-Days

Python - 100天从新手到大师

starrpeaker

STARR-seq peak caller