Juan Ignacio Diaz Hernandez's repositories
Artificial-Intelligence-Projects
Collection of Artificial Intelligence projects realised by me using Python.
bluebert
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
CliNER
Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in clinical text of electronic health records.
clinicalBERT
repository for Publicly Available Clinical BERT Embeddings
coding-interview-university
A complete computer science study plan to become a software engineer.
emnlp2017-bilstm-cnn-crf
BiLSTM-CNN-CRF architecture for sequence tagging
etlalchemy
Extract, Transform, Load: Any SQL Database in 4 lines of Code.
full-speed-python
Full Speed Python: a book for self-learners
gene_lists
List of gene lists for genomic analyses.
gru_ode_bayes
Pytorch implementation of GRU-ODE-Bayes
homemade-machine-learning
🤖 Python examples of popular machine learning algorithms with interactive Jupyter demos and math being explained
learn-python
📚 Playground and cheatsheet for learning Python
machine_learning_examples
A collection of machine learning examples and tutorials.
mimic-lstm
This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical events in the intensive care unit"
mxnet-the-straight-dope
An interactive book on deep learning. Much easy, so MXNet. Wow.
neo4j
Graphs for Everyone
NER_conll2002_dataset
Dataset for Spanish NER from Conll2002
open-source-rover
A build-it-yourself, 6-wheel rover based on the rovers on Mars!
Production-Level-Deep-Learning
This repo attempts to serve as a guideline for building practical production-level deep learning systems to be deployed in real world applications.
sbwce
Spanish Billion Word Corpus and Embeddings
scibert
A BERT model for scientific text.
sequence_tagging
Named Entity Recognition (LSTM + CRF) - Tensorflow
Snomed2Vec
New approach to use Snomed-CT Concept using Word Embedding with Word2vec
SNOMEDCT_mapper
Python tool for mapping free text to SNOMED CT Terms
stockpredictionai
In this noteboook I will create a complete process for predicting stock price movements. Follow along and we will achieve some pretty good results. For that purpose we will use a Generative Adversarial Network (GAN) with LSTM, a type of Recurrent Neural Network, as generator, and a Convolutional Neural Network, CNN, as a discriminator. We use LSTM for the obvious reason that we are trying to predict time series data. Why we use GAN and specifically CNN as a discriminator? That is a good question: there are special sections on that later.
TensorFlow-Examples
TensorFlow Tutorial and Examples for Beginners with Latest APIs
TumorType-WGS
Classifying tumor types based on Whole Genome Sequencing (WGS) data