jiaojiao's repositories
ACSL
Adaptive Class Suppression Loss for Long-Tail Object Detection--CVPR2021
Automatic-Neural-Architecture-Design
Automatic ConvNet search using Genetic Algorithm
bdhehohai.github.io
bdhehohai的个人主页
BERT6mA
This package provides the CLI of BERT6mA. The BERT6mA predicts 6mA sites for 11 species.
CAT
CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Deep-Learning-with-TensorFlow-book
深度学习入门开源书，基于TensorFlow 2.0案例实战。Open source Deep Learning book, based on TensorFlow 2.0 framework.
DeepFRI
Deep functional residue identification
diamond
Accelerated BLAST compatible local sequence aligner.
FastANI
Fast Whole-Genome Similarity (ANI) Estimation
gene-sequence-clustering
accurate and fast gene greedy clustering tool
GeneticAlgorithmPython
Source code of PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).
gtdb-taxdump
GTDB taxonomy taxdump files with trackable TaxIds
gtdb_to_taxdump
Convert GTDB taxonomy to NCBI taxdump format
improved-bagan-gp
Generate high quality images for each class even with an imbalanced dataset. An improved version of Balancing GAN.
metaWRAP
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
N2A-SVM
The dataset of article "Predicting Parkinson's Disease Genes Based on Node2vec and Autoencoder"
Neuvol
Genetic algorithm framework to find the best neural network architecture with PyTorch
ProtTrans
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
RSPapers
Must-read papers on Recommender System.
siamese-triplet
Siamese and triplet networks with online pair/triplet mining in PyTorch
tune-sklearn
A drop-in replacement for Scikit-Learn’s GridSearchCV / RandomizedSearchCV -- but with cutting edge hyperparameter tuning techniques.
vit-pytorch
Implementation of Vision Transformer, a simple way to achieve SOTA in vision classification with only a single transformer encoder, in Pytorch