jianhuupenn

SpaGCN

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

ItClust

Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis

TESLA

Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA

Sleep-stage-classification

Sleep stage classification based on Recurrent neural networks using wrist-worn device data

MorphLink

xfuse

Super-resolved spatial transcriptomics by deep data fusion

BayesSpace

Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.

dec-pytorch

desc

Deep Embedding for Single-cell Clustering

esvd

practical-pytorch

PyTorch tutorials demonstrating modern techniques with readable code

pytorch-tutorial

PyTorch Tutorial for Deep Learning Researchers

stLearn

A novel machine learning pipeline to analyse spatial transcriptomics data

Tangram

Spatial alignment of single cell transcriptomic data.

The-world-of-faculty