jianhuig

pspa

post-prediction adaptive inference

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

icd-prediction-mimic

Predicting ICD Codes from Clinical Notes

phenotyping

This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping".

WorkshopPRS

Workshop materials on Polygenic Risk Score

betacal

CMplot

📊 Circular and Rectangular Manhattan Plot

Rx-thorax-automatic-captioning

EHR-based-Study

SAMBA

Selection and Misclassification Bias Adjustment for Logistic Regression Models

PheCAP

https://celehs.github.io/PheCAP/

ieugwasr

R interface to the IEU GWAS database API

clinicalBERT

repository for Publicly Available Clinical BERT Embeddings

FINDOR

ut-thesis

University of Toronto thesis class for LaTeX

Minimac4

LDServer

Fast API server for calculating linkage disequilibrium

emeraLD

tools to efficiently retrieve and calculate LD

Integrate-gwas

IntAssoPlot

CADD-scripts

CADD scripts release for offline scoring. For more information about CADD, please visit our website

scattermore

very fast scatterplots for R

PheRS

PheWAS

The PheWAS R package

UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

DXY-COVID-19-Crawler

2019新型冠状病毒疫情实时爬虫及API | COVID-19/2019-nCoV Realtime Infection Crawler and API