Jian-Guo Zhou's repositories
ML_ICI.fast.progression
The R code for Machine Learning Based on Blood Test Biomarkers Predicts Fast Progression in Advanced NSCLC Patients Treated with Immunotherapy
enlight-deeppt-data
This repository contains data and other materials related to the DeepPT manuscript
awesome-github-profile-readme
😎 A curated list of awesome GitHub Profile READMEs 📝
d2l-zh
《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。
DAISY_Public
Public repository supporting the paper of the DAISY study.
dNdSSimulator
dNdS Simulator uses R to simulate a stochastic branching process with a set of genotypes and phenotypes per cell. The main advantage of the model is that simulates immunoediting by introducing immunogenic and escape mutations as well as driver and passenger mutations
Drews2022_CIN_Compendium
Main repository for Drews et al. (Nature, 2022)
easieR
building and progression of easieR as an R metapackage using dialog box (only French version for now)
enlight-data
Datasets to accompanied ENLIGHT manuscript
forestploter
Draw forest plot
GC_pathomics
Source codes for statistical analysis
im4MEC
Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometrial cancer from haematoxylin and eosin-stained whole-slide images: a combined analysis of the PORTEC randomised trials and clinical cohorts'.
IRLS
Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal cancer
MBS-paper
codes and data
MORRISON-1-public
public facing repository for processed data related to MORRISON 1
MultiStainDeepLearning
Code from Foersch et al. (Under Construction / Development)
pdl1io
radiomics predictor for non-small cell lung cancer treated with pd1/pdl1 inhibitor immunotherapy
ProjecTILs
Interpretation of T cell states using reference single-cell atlases
visium_heart
Spatial transcriptomics of heart tissue