Jeremy Goecks (jgoecks)

jgoecks

Geek Repo

Company:@goeckslab

Location:Tampa, Florida

Home Page:https://goeckslab.org

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Jeremy Goecks's starred repositories

open-interpreter

A natural language interface for computers

Language:PythonLicense:AGPL-3.0Stargazers:51117Issues:382Issues:887

xgboost

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow

Language:C++License:Apache-2.0Stargazers:25883Issues:912Issues:5227

altair

Declarative statistical visualization library for Python

Language:PythonLicense:BSD-3-ClauseStargazers:9100Issues:143Issues:1969

lab

A customisable 3D platform for agent-based AI research

Language:CLicense:NOASSERTIONStargazers:7067Issues:467Issues:226

machine-learning-cheat-sheet

Classical equations and diagrams in machine learning

cleverhans

An adversarial example library for constructing attacks, building defenses, and benchmarking both

Language:Jupyter NotebookLicense:MITStargazers:6125Issues:189Issues:453

macos-terminal-themes

Color schemes for default macOS Terminal.app

EQGRP

Decrypted content of eqgrp-auction-file.tar.xz

sweetviz

Visualize and compare datasets, target values and associations, with one line of code.

Language:PythonLicense:MITStargazers:2871Issues:53Issues:135

galaxy

Data intensive science for everyone.

Language:PythonLicense:NOASSERTIONStargazers:1350Issues:71Issues:6096

data-centric-ai

Resources for Data Centric AI

Language:TeXLicense:Apache-2.0Stargazers:1085Issues:68Issues:7

datacleaner

A Python tool that automatically cleans data sets and readies them for analysis.

Language:PythonLicense:MITStargazers:1049Issues:57Issues:13

toil

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

Language:PythonLicense:Apache-2.0Stargazers:887Issues:56Issues:2952

bowtie

:bowtie: Create a dashboard with python!

Language:PythonLicense:MITStargazers:764Issues:26Issues:114

Vegas

The missing MatPlotLib for Scala + Spark

Language:ScalaLicense:MITStargazers:730Issues:43Issues:104

distribution_diagrams

R-script for generating canonical diagrams of distributions to be used to describe Bayesian hierarchical models.

Language:HTMLLicense:MITStargazers:402Issues:35Issues:3

scikit-allel

A Python package for exploring and analysing genetic variation data

Language:Jupyter NotebookLicense:MITStargazers:283Issues:26Issues:260

ga4gh-schemas

Models and APIs for Genomic data. RETIRED 2018-01-24

Language:PythonLicense:Apache-2.0Stargazers:214Issues:101Issues:356

ClinicalDataSources

Open or Easy Access Clinical Data Sources for Biomedical Research

gdcp

scp like tool to interact with Google Drive from the command-line

Language:PythonLicense:NOASSERTIONStargazers:161Issues:21Issues:30

cognoma

Putting machine learning in the hands of cancer biologists

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:96Issues:44Issues:32

TileDB

TileDB

Language:C++License:MITStargazers:80Issues:32Issues:20

deep_learning_works

Code to accompany "You can probably use deep learning even if your data isn't that big" blog post

Language:PythonLicense:MITStargazers:73Issues:5Issues:0

tiny-test-data

Super small biological datasets for unit testing

Language:PythonLicense:MITStargazers:61Issues:8Issues:3

xenaPython

Python API for Xena Hub

Language:PythonLicense:Apache-2.0Stargazers:51Issues:7Issues:5

g2p-aggregator

Associations of genomic features, drugs and diseases

intropolis

Exon-exon splice junctions across SRA

bioschemas

ga4gh, gdc and bmeg in one place

Language:Protocol BufferLicense:MITStargazers:3Issues:0Issues:0

bcc

LabKey module for Brenden-Colson Center

Language:HTMLStargazers:3Issues:0Issues:0

galaxy

Data intensive biology for everyone.

Language:PythonLicense:NOASSERTIONStargazers:1Issues:0Issues:0