jfernandoghe / Bioinformatics-with-Python-101

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Introduction

This book is meant for those programmers, Bioinformatics and researchers looking for a way to start programming with Python or desire to expand the knowledge in the Bioinformatics area.

This book takes examples from Rosalind website (http://rosalind.info/problems/dna/) which provides a great overview of coders and software developers tackle "common" programming problems, and how to resolve them. Also Biopython Tutorial and Cookbook {Chang, Jeff, et al. "Biopython Tutorial and Cookbook." (2010).} and Bioinformatics Programming using Python {Model, Mitchell L.Bioinformatics programming using Python. OReilly Media, 2010.} are being cited here. The objetive of this book is an effort to bring both areas together, Programming and Bioinformatics in a way that people from this areas adapt rapidly. In most of the examples I will provide explanation in both Spanish and English, as this book is thought for a larger audience.

Este libro esta pensado en programadores y científicos de Bioinformática que están buscando una guía rápida para entender ambas ramas, complementando conocimientos y dando un panorama general.

Este libro toma referencias, conocimientos y ejercicios de sitio web Rosalind (http://rosalind.info/problems/dna/) que nos da un gran número de ejercicios relacionados al campo de la biología molecular, química y áreas a fín. La manera de describir los problemas invita a los programadores y científicos investigadores a aportar y visualizar el problema desde su área de expertise. Se toman ejemplos de los siguientes libros, Biopython Tutorial and Cookbook {Chang, Jeff, et al. "Biopython Tutorial and Cookbook." (2010).} y Bioinformatics Programming using Python {Model, Mitchell L.Bioinformatics programming using Python. OReilly Media, 2010.} En la mayoría de los ejemplos se provee una explicación tanto en Español como en Inglés para abarcar una mayor audiencia.

Prerequisites/Prerequisitos

-Basic programming knowlegde notion/Noción de conocimientos básicos de programación

-Basic chemestry and biology knowledge/Conocimientos básicos de Biología y Química

-Algebra, geometry and visual interpretation of both/Álgebra, geometría y la interpretación gráfica de ambas

Any question, advice or inquiry please feel free to contact in the followings:

José Fernando González Herrera jfernandoghe@gmail.com Greetings

Copyright 2017 - José Fernando González Herrera

This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program.  If not, see <http://www.gnu.org/licenses/>.

About

License:GNU General Public License v3.0


Languages

Language:Python 99.9%Language:OpenEdge ABL 0.1%