Jessica Bonnie's repositories
BioThingsClient.R
This is a unified R client for BioThings APIs (http://biothings.io)
cobind
collocation analysis of genomics regions
CS601_633
Intro to Algorithms, Fall 2019
dandd_experiments
Delta-Delta Experiments
dashing2
Dashing 2 is a fast toolkit for k-mer and minimizer encoding, sketching, comparison, and indexing.
E-Vote-Django
Elect-ron is a full featured online voting app with features such as poll creation, bulk users, eligibility check for voters.
evote
A system for secure, trusted, and verifiable voting on the web
Farewell_CPHG
Code written at the Center for Public Health Genomics
GTExV6PRareVariation
Repository to reproduce analyses from the GTEx V6P Rare Variation Manuscript
GWAS-Pipedream
Pipeline to perform basic SNP, gender, and population QC on genomic data.
hammock
experiment repo for bed sketching approach hammock
MA553_291
Linear Algebra and Differential Equations, Fall 2019
MLexploreR
Acts as a lightweight machine learning exploration portal, currently focused on structured data alone. A user can test a variety of machine learning models on data, while also assessing various features and statistical measures of the data.
my-reps
:busts_in_silhouette: Enter your address to find your elected representatives. Powered by the Google Civic Information API
my-reps-pbp
Look up who represents you at various levels of government.
myvariant.info
MyVariant.info: A BioThings API for human variant annotations
RSocrata
Provides easier interaction with Socrata open data portals http://dev.socrata.com. Users can provide a 'Socrata' data set resource URL, or a 'Socrata' Open Data API (SoDA) web query, or a 'Socrata' "human-friendly" URL, returns an R data frame. Converts dates to 'POSIX' format. Manages throttling by 'Socrata'.
sketch
C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings
starter-hugo-academic
🎓 创建一个学术网站. Easily create a beautiful academic résumé or educational website using Hugo, GitHub, and Netlify.
va-datathon-2017
Virginia Datathon on the Opioid Epidemic
Watershed
Prioritization of functional rare genetic variants by integrating genomic annotations and RNA-seq
workshops-1
Bioconnector Workshops