Greg Slodkowicz's repositories
slr_pipeline
Pipeline for mapping SLR results for Eutheria onto the available structures from PDB
Language:Python000
000
greg-ensembl
A repository of Greg's Ensembl perl stuff.
Language:Perl000
homebrew
:beer: The missing package manager for OS X.
Language:RubyNOASSERTION000
pipeline-transcriptome-de
Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
NOASSERTION000
pyranges
(beta) Performant Pythonic GenomicRanges
Language:PythonMIT000
swmutsel
Implementation of the site-wise mutation-selection model (swMutSel) described in Tamuri et al. Genetics. (2012, 2014)
Language:JavaApache-2.0000
tdg09
Software and data used in Tamuri AU, dos Reis M, Hay AJ, Goldstein RA (2009) Identifying Changes in Selective Constraints: Host Shifts in Influenza. PLoS Comput Biol 5(11): e1000564 doi:10.1371/journal.pcbi.1000564
Language:Java000