jeffhsu3 / mimRNA

Useful functions to use with edgeR

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

An R and python package to analyze correlations between mRNA and miRNAs.  
Requires:
    edgeR
    biomaRt
    ggplot2

TODO List:
1. Grab TargetScan database from ensembl instead of local file
2. Fix up plotting functions
3. Fix up enrichment analysis


Written by Jeff Hsu 2011

About

Useful functions to use with edgeR


Languages

Language:R 98.9%Language:Python 1.1%