Jean-Paul R. Soucy's repositories
cssc-2021-r-shiny-workshop
What makes R Shiny so shiny? A step-by-step introduction to interactive dashboards in R
covid-19-coinfection-metaregression
Predictors and Microbiology of Co-Infection in Patients with COVID-19: Living Rapid Review Update and Meta-Regression
covid-19-mobility
Public transit mobility as a leading indicator of COVID-19 transmission in 40 cities during the first wave of the pandemic
covid-19-patients-amr-meta-analysis
Antimicrobial resistance in patients with COVID-19: a systematic review and meta-analysis
backandnow
Bayesian back-calculation and nowcasting for line list data
california-counties-suicide-and-temperature
The Effect of Average Temperature on Suicide Rates in Five Urban California Counties, 1999–2019: An Ecological Study
canada-covid-vaccine-coverage
Vaccine coverage time series for Canada, by province/territory.
canada-mortality-rates-by-age
Plot of mortality rates in Canada by age group (2019)
citymapper-mobility-index
Data scrapped from Citymapper Mobility Index
covid-19-amr-meta-analysis
Antibiotic resistance associated with the COVID-19 pandemic: a systematic review and meta-analysis
covid-19-antibiotic
Antibiotic prescribing in patients with COVID-19: A rapid review and meta-analysis (supporting analyses and interactive dashboard)
covid-19-canada-gov-data-montreal
A mirror of Montreal files available from the Archive of COVID-19 Data from Canadian Government Sources.
covid-19-cargill
Simulated transmission network of COVID-19 cases associated with the Cargill meat-packing plant in High River, Alberta
covid-19-mobility-responsiveness
Characterizing responsiveness to the COVID-19 pandemic in the United States and Canada using mobility data
covid-alert-data
Open data reported by the COVID Alert system, in CSV format / Données ouvertes recueillies par le système Alerte COVID, au format CSV
covid-random-charts
Random charts from the COVID-19 pandemic
data-gripes
Additional content for the Data Gripes blog & newsletter (https://data.gripe).
dlsph-student-conf-2022-web-scraping-workshop
Slides, data and code for the workshop "Web scraping for public health"
ices-vaccine-coverage-by-fsa-time-series
Time series of vaccine coverage in Ontario by FSA (derived from ICES COVID-19 Dashboard)
lyme-usa-1993-2009
Plot USA Lyme disease incidence at state or national level
on-pharmacy-covid-vaccines
Download and process current and historical COVID-19 pharmacy vaccine locations in Ontario.
r-approx-1
An example of a nearly perfect correlation in the scientific literature.
west-nile-canada
Plot Reported West Nile Cases in Canada