jdkoen

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Josh Koen's starred repositories

generative-ai-for-beginners

18 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/

Language:Jupyter NotebookMIT5771300

eBOSC_py

extended Better Oscillation Detection method, implemented in python

Language:PythonGPL-3.0400

mne-faster

Automatic EEG bad channel/epoch/ICA-component detection using FASTER

Language:PythonBSD-3-Clause1700

pyedfread

A library to parse SR research EDF files into python.

Language:CythonBSD-2-Clause4300

ORCA

The Oscillatory Reconstruction Algorithm (ORCA)

Language:MATLAB200

awesome-mne

A curated list of awesome MNE tutorials, projects and communities.

BSD-3-Clause800

cs-for-psych

Course materials for PSYC 132: Introduction to Programming for Psychological Scientists

Language:Jupyter NotebookMIT8800

pyedflib

pyedflib is a python library to read/write EDF+/BDF+ files based on EDFlib.

Language:PythonBSD-3-Clause20900

ERP-beamformer

A beamformer filtering approach to ERP analysis. Used in van Vliet et al. TBME, 2016

Language:PythonBSD-3-Clause600

omission_frontiers

Code for omission frontiers

Language:Matlab100

mne_microstates

Microstate analysis for use with MNE-Python

Language:PythonBSD-3-Clause4400

neuroscience_tutorials

Some tutorials for students of neuroscience

Language:Jupyter NotebookBSD-2-Clause10500

mne-rsa

Representational Similarity Analysis on MEG and EEG data

Language:PythonBSD-3-Clause5200

emergent

Biologically based neural network simulations of the brain written in Go with a 3D GUI powered by Cogent Core.

Language:GoBSD-3-Clause17700

cheatsheets

Official Matplotlib cheat sheets

Language:PythonBSD-2-Clause730300

binorg_decoding

Bin-Organized Decoding (edit Bae&Luck, 2018).

Language:MATLABGPL-3.03000

ptsa

PTSA - Python Time Series Analysis

Language:PythonGPL-3.02000

mne-workshops

A collection of workshop materials.

Language:Jupyter NotebookBSD-3-Clause3200

templateexperiments

This is scaffolding for building cognitive experiments in psychopy

Language:PythonGPL-3.01400

IEM-tutorial

tutorial and example scripts for implementing inverted encoding model analysis framework

Language:Matlab2800

datamatrix

An intuitive, Pythonic way to work with tabular data

Language:PythonGPL-3.02400

CDL-tutorials

Repo containing useful tutorials on different topics, methods, software tools, and packages used by the CDL

Language:Jupyter Notebook1600

leabra7

A Python package for simulating recurrent, biologically-realistic neural networks

Language:Jupyter NotebookMIT100

Leabra7-CLS-Modeling

CLS modeling in Daniel Greenidge's Python Adaptation of Leabra Algorithm from Emergent 7

Language:PythonGPL-3.0200

omission_frontiers

Analysis scripts for group analysis of MEG data in both Python and MATLAB associated with Andersen, L.M., 2018. Group Analysis in MNE-Python of Evoked Responses from a Tactile Stimulation Paradigm: A Pipeline for Reproducibility at Every Step of Processing, Going from Individual Sensor Space Representations to an across-Group Source Space Representation. Front. Neurosci. 12. https://doi.org/10.3389/fnins.2018.00006 and Andersen, L. M. Group Analysis in FieldTrip of Time-Frequency Responses: A Pipeline for Reproducibility at Every Step of Processing, Going From Individual Sensor Space Representations to an Across-Group Source Space Representation. Front. Neurosci. 12, (2018). https://10.3389/fnins.2018.00261

Language:MATLAB2200

psyc161

An Introduction to Programming for Psychologists & Neuroscientists Course at Dartmouth PBS

Language:Jupyter Notebook2100

CapstoneProject

SMU Capstone Project for Data Science

Language:Jupyter Notebook100

TreeBUGS

R package for fitting hierarchical multinomial processing tree (MPT) models

Language:R1200