jclauneuro

thesis_template

doctoral thesis

ANTs

Advanced Normalization Tools (ANTs)

BHG18_afidprotocol

binder-examples-r

Using R with Jupyter / RStudio on Binder

dlearn_uhf

Predicting histological features from MRI using deep learning

fiind

Interactive multimodal atlas of the development of the ferret brain.

fuzzy

A fuzzy ecosystem for evaluating the stability of your computational tools.

HippUnfolding

Code for unfolding of hippocampal grey matter using Laplacian equation. Requires manual labelling of the hippocampal 'dark band' and grey matter, as well as some surrounding structures (see associated publication for instructions)

jclauneuro.github.io

neurosynth-mfc

Code, data, and results for De La Vega, Chang, Banich, Wager & Yarkoni. Journal of Neuroscience (2016).

ni-notebooks

nilearn notebooks

notable

The Markdown-based note-taking app that doesn't suck.

RheMAP

Non-linear warps between common rhesus macaque brain templates

sandboxpub

snakemakehippo

zona-analysis

zona incerta study