Jim Abraham's repositories
activejdbc-gradle-plugin
Gradle plugin for instrumenting ActiveJDBC model classes.
arethusa
Arethusa: Annotation Environment
aws
Easy command line access to Amazon EC2, S3, SQS, ELB, and SDB
Data-Science-For-Beginners
10 Weeks, 20 Lessons, Data Science for All!
deming2018
Presentation for Deming Conference in December 2018
emacs24-starter-kit
A cleaner version of the literate starter kit based on Emacs24
empirical-bayes-book
Introduction to Empirical Bayes: Examples from Baseball Statistics
express-s3-router
A RESTful API for AWS S3 using Express
flintrock
A command-line tool for launching Apache Spark clusters.
fqgrep
An approximate sequence pattern matcher for FASTQ/FASTA files.
logeion-plautus
Scripts for mapping line numbers for Plautus plays to Logeion references.
ML_for_Hackers
Code accompanying the book "Machine Learning for Hackers"
MLOps
MLOps template with examples for Data pipelines, ML workflow management, API development and Monitoring.
nf-training-advanced
Customer workshop materials
Novel-Devotions
Andrew Piper's "Novel Devotions" (looking at Augustine's Confessions)
orchid
A novel management, annotation, and machine learning framework for analyzing cancer mutations
passwordless-postgrestore
PostgreSQL TokenStore for Passwordless
patterns
A curated collections of Nextflow implementation patterns -- http://nextflow-io.github.io/patterns/index.html
powerline
emacs powerline
PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
pyunicorn
Unified Complex Network and Recurrence Analysis Toolbox
rds_secret_rotation
Manage RDS Secret using AWS Secret Manager
stitchr
(Data)Stitchr -- tools for data processing and manipulation, based on Spark
yawsso
Yet Another AWS SSO - sync up AWS CLI v2 SSO login session to legacy CLI v1 credentials