jarny / stemcellhack

Guide on using the data from stemformatics.org

stemcellhack

Guide on using the data from stemformatics.org

Download the data files

Go to stemformatics.org/atlas and use "more..." > download to get 3 files.

Set up your environment using conda

If you want to run the jupyter notebook from this repository, follow these instructions.

a) Download conda if you don't already have it (https://www.anaconda.com/distribution/)

b) Create a new conda environment and activate it

conda create -n stemcellhack
source activate stemcellhack

c) Use conda to install required packages

conda install pandas scikit-learn plotly jupyter

d) Start jupyter notebook and load the .ipynb file from this repo.

jupyter notebook