jan-matthis

papers

Simple reference management

jupyter-css

Minimal stylesheet for Jupyter

ansible_julia

Ansible role to install Julia on Linux

ansible_git_dotfiles

Ansible role to manage dotfiles using a bare Git repository

jupyter-presentation

Stylesheets for presentations in jupyter notebook

pytorch_segmentation_demo

Demo implementing a U-Net in PyTorch for tutorial at Janelia ML/CV workshop

ansible_miniconda

Ansible role to install Miniconda on Unix

ansible_workstation

automacdoc

Automatic generation of documentation for mkdocs

benchmark

delfi

Density estimation likelihood-free inference

engine

A Generic Framework for Likelihood-Free Inference

fabrq

Fabfiles to manage Python RQ

FlatironMeeting

Meeting repo for likelihood free inference meeting

hydra

Hydra is a framework for elegantly configuring complex applications

hydra_range_sweeper

Hydra range sweeper

icg-nrn-sim

NEURON tool to run voltage clamp protocols against .mod files

jan-matthis.github.io

Personal website

mie18

neuroglancer

WebGL-based viewer for volumetric data

pyro

Deep universal probabilistic programming with Python and PyTorch

rq-dashboard

Flask-based web front-end for monitoring RQ queues

sbi

Simulation-based inference toolkit

sbibm

Simulation-based inference benchmark

sphinx_rtd_theme

Minimal sphinx theme based on Read the Docs

task-spooler

fork of ts (task spooler by Lluís Batlle i Rossell) to add GNU/Autotools support, and some helper to generate packages

torch_sampling

Efficient reservoir sampling implementation for PyTorch

tpy

Runs commands in tmux

visdom

A flexible tool for creating, organizing, and sharing visualizations of live, rich data. Supports Torch and Numpy.

wavetable

Wavetable generator for Plinky