Jaclyn Taroni's repositories
2020-rladies-phl-ml
Code for R-Ladies Philly 2020 Hands-on Machine Learning Workshop
2019-applied-bioinformatics
refine.bio and advanced machine learning topics material for MDIBL Applied Bioinformatics 2019
2021-mdibl-fair
Instruction materials for MDIBL's 2021 Reproducible and FAIR Bioinformatics Analysis of Omics Data course
mdibl-gh-demo
A repository for practicing with GitHub
RNA-Seq-Exercises
Exercises for training scientists to perform some RNA-seq analyses.
adage-server
Webserver for ADAGE models.
alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
ccdl_header
Code to generate header image for Childhood Cancer Data Lab website
gitbookdocs
Documentation for our gitbook
multi-plier
A unsupervised transfer learning approach for rare disease transcriptomics
OpenPBTA-analysis
The analysis repository for the Open Pediatric Brain Tumor Atlas Project
OpenPBTA-manuscript
The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
openpbta-notebook-concept
For hosting notebooks associated with OpenPBTA project via GitHub Pages
OpenScPCA-analysis
An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
psb-manuscript
Manuscript source for the People of the Pacific Symposium on Biocomputing
RLadies_Spatial
Data for the RLadies Spatial Workshop on 11/28/2018
rrp-workshop-exercises
Materials for reproducible research practices workshop exercises.
Speakers
Do you want to speak at a Richmond (RVA) meetup? How about find a speaker for your meetup? You're in the right place!
sra-ena-compare
Compare transcript estimates between ENA and SRA fasterq-dump
training-modules
A collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.