iyassou / umatrix

A matrix library for the MicroPython language

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

umatrix - A matrix library for MicroPython

Features

umatrix was written mainly with speed and ease-of-use in mind. It aims to be a simple solution to matrix arithmetic needs in Micropython. It implements basic matrix operations (addition, subtraction, multiplication) as well as determinant (shortened to det), inverse, trace, transpose, copy, and other functions. The matrix class supports int, float, and complex coefficients, as well as numpy-like matrix slicing.

Examples

Creating and viewing a matrix

>>> from umatrix import *
>>> A = matrix([1, 2, 3], [4, 5, 6], [7, 8, 9])
>>> A
matrix( [1,     2,      3],
        [4,     5,      6],
        [7,     8,      9] )
>>> M = matrix([12, 23, 31], [40, 50, 60], [71, 87, 98])
>>> print(M)
[12,    23,     31,
 40,    50,     60,
 71,    87,     98]
>>> N = matrix([12.516j, 6.345, 7+.171j], are_rows=False)
>>> N
matrix( [   12.516j],
        [     6.345],
        [(7+0.171j)] )

Matrix properties

>>> A.order
3
>>> A.is_square
True
>>> N.is_square
False
>>> N.shape
(3, 1)
>>> N.rows
[[12.516j], [6.345], [(7+0.171j)]]
>>> N.cols
[[12.516j, 6.345, (7+0.171j)]]

Adding, subtracting, multiplying, raising to the power of n

>>> A+M
matrix( [ 13,    25,     34],
        [ 44,    55,     66],
        [ 78,    95,    107] )
>>> M-A
matrix( [11,    21,     28],
        [36,    45,     54],
        [64,    79,     89] )
>>> A*M
matrix( [ 305,   384,    445],
        [ 674,   864,   1012],
        [1043,  1344,   1579] )
>>> M*A
matrix( [ 321,   387,    453],
        [ 660,   810,    960],
        [1105,  1361,   1617] )
>>> A**2
matrix( [ 30,    36,     42],
        [ 66,    81,     96],
        [102,   126,    150] )
>>> M*2
matrix( [ 24,    46,     62],
        [ 80,   100,    120],
        [142,   174,    196] )
>>> 2*M
matrix( [ 24,    46,     62],
        [ 80,   100,    120],
        [142,   174,    196] )

Determinant / det

Supports <= 4x4 matrices.

>>> A.det
0
>>> M.det
1810
>>> abs(M)
1810
>>> N.det
[Traceback]
AssertionError: Matrix must be square.

Inverse.

Supports <= 4x4 matrices.

>>> A.inverse
[Traceback]
AssertionError: Matrix is singular.
>>> M.inverse
matrix( [ -0.1767956,     0.2447514,    -0.09392265],
        [  0.1878453,    -0.5662984,      0.2872928],
        [-0.03867403,     0.3254144,     -0.1767956] )

Rounding a matrix.

Note that calling round on a matrix will not work as Micropython has not implemented the __round__ magic method, so rounding a matrix requires you call its defined round method with the accustomed decimal places argument. The round method supports complex coefficients. The boolean argument inplace set to False by default makes the changes "in place" when set to True.

>>> (M*M.inverse).round(5)
matrix( [ 1.0,   0.0,   -0.0],
        [ 0.0,   1.0,    0.0],
        [ 0.0,  -0.0,    1.0] )
>>> N
matrix( [12.516j],
        [6.345],
        [(7+0.171j)] )
>>> N.round(2, True)
>>> N
matrix( [12.52j],
        [6.34],
        [(7+0.17j)] )

Copying a matrix

>>> B = M.copy()
>>> M
matrix( [12,    23,     31],
        [40,    50,     60],
        [71,    87,     98] )
>>> B[0] = [2222,2222,2222]
>>> B
matrix( [2222,  2222,   2222],
        [  40,    50,     60],
        [  71,    87,     98] )
>>> M
matrix( [12,    23,     31],
        [40,    50,     60],
        [71,    87,     98] )
>>> M.det == B.det
False

Transpose

>>> A
matrix( [1,     2,      3],
        [4,     5,      6],
        [7,     8,      9] )
>>> A.transpose
matrix( [1,     4,      7],
        [2,     5,      8],
        [3,     6,      9] )
>>> N
matrix( [12.516j],
        [6.345],
        [(7+0.171j)] )
>>> N.transpose
matrix( [12.516j,       6.345,  (7+0.171j)] )

Trace

>>> A
matrix( [1,     2,      3],
        [4,     5,      6],
        [7,     8,      9] )
>>> A.trace
15
>>> M
matrix( [12,    23,     31],
        [40,    50,     60],
        [71,    87,     98] )
>>> M.trace
160

Eigenvalue and eigenvector checking

is_eigenvalue takes the value to check as its single argument. is_eigenvector takes the vector and value to check respectively: the vector can be given in tuple/list form or in matrix form.

>>> C = matrix([1, 2], [2, 1])
>>> C
matrix( [1,     2],
        [2,     1] )
>>> C.is_eigenvalue(2.431)
False
>>> C.is_eigenvalue(3)
True
>>> C.is_eigenvalue(-1)
True
>>> C.is_eigenvector((1, -1), -1)
True
>>> C.is_eigenvector(matrix([1, 1], are_rows=False), 3)
True

Equality tests

>>> A == M
False
>>> N != A
True
>>> A == A.copy()
True

apply

This method takes a function and the boolean inplace as its arguments. It applies that function to the matrix's coefficients and either returns a new matrix with the return values or overwrites the initial matrix's coefficients. By default, inplace = False.

>>> A
matrix( [1,     2,      3],
        [4,     5,      6],
        [7,     8,      9] )
>>> from math import log
>>> A.apply(log).round(2)
matrix( [ 0.0,  0.69,    1.1],
        [1.39,  1.61,   1.79],
        [1.95,  2.08,    2.2] )
>>> A.apply(lambda x: x if x > 5 else 0, inplace=True)
>>> A
matrix( [0,     0,      0],
        [0,     0,      6],
        [7,     8,      9] )

numpy-like matrix slicing

Referencing a matrix with a tuple of either two slices or a slice and an int returns a new matrix. You can also modify matrix coefficients by assigning values to a matrix slice. Note that for changing the value of a specific coefficient, you should use matrix[idx1][idx2] = new_val and not a slice assignment.

>>> Z = matrix([1,2,3,4],[5,6,7,8],[8,9,0,1],[2,3,4,5],[6,7,8,9])
>>> Z
matrix( [1,     2,      3,      4],
        [5,     6,      7,      8],
        [8,     9,      0,      1],
        [2,     3,      4,      5],
        [6,     7,      8,      9] )
>>> Z[:, 3]
matrix( [4],
        [8],
        [1],
        [5],
        [9] )
>>> Z[0, ::2]
matrix( [1,     3] )
>>> Z[1:4, 1:]
matrix( [6,     7,      8],
        [9,     0,      1],
        [3,     4,      5] )
>>> Z[::2, 2]
matrix( [3],
        [0],
        [8] )
>>> Z[::2, 2] = 1111, 1111, 1111
>>> Z
matrix( [   1,     2,   1111,      4],
        [   5,     6,      7,      8],
        [   8,     9,   1111,      1],
        [   2,     3,      4,      5],
        [   6,     7,   1111,      9] )
>>> Z[:, 2:]
matrix( [1111,     4],
        [   7,     8],
        [1111,     1],
        [   4,     5],
        [1111,     9] )
>>> Z[:, 2:] = [[0]*2]*5
>>> Z
matrix( [1,     2,      0,      0],
        [5,     6,      0,      0],
        [8,     9,      0,      0],
        [2,     3,      0,      0],
        [6,     7,      0,      0] )
>>> Z[1, ::2]
matrix( [5,     0] )
>>> Z[1, ::2] = [5555, 5555]
>>> Z
matrix( [   1,     2,      0,      0],
        [5555,     6,   5555,      0],
        [   8,     9,      0,      0],
        [   2,     3,      0,      0],
        [   6,     7,      0,      0] )
>>> Z[4][1] = 9999
>>> Z
matrix( [   1,     2,      0,      0],
        [5555,     6,   5555,      0],
        [   8,     9,      0,      0],
        [   2,     3,      0,      0],
        [   6,  9999,      0,      0] )

Useful functions: eye, fill, zeros, ones

Note that for fill, zeros, and ones, if the number of columns is not supplied as a final argument a square matrix is returned. eye always returns a square matrix.

  • eye: returns the identity matrix.
>>> eye(4)
matrix( [1,     0,      0,      0],
        [0,     1,      0,      0],
        [0,     0,      1,      0],
        [0,     0,      0,      1] )
  • fill: returns a matrix filled with the coefficient of your choice.
>>> fill(25, 3, 6)
matrix( [25,    25,     25,     25,     25,     25],
        [25,    25,     25,     25,     25,     25],
        [25,    25,     25,     25,     25,     25] )
>>> fill(3.14, A.order)
matrix( [3.14,  3.14,   3.14],
        [3.14,  3.14,   3.14],
        [3.14,  3.14,   3.14] )
  • zeros: returns a matrix filled with zeros.
>>> zeros(5,4)
matrix( [0,     0,      0,      0],
        [0,     0,      0,      0],
        [0,     0,      0,      0],
        [0,     0,      0,      0],
        [0,     0,      0,      0] )
  • ones: returns a matrix filled with ones.
>>> ones(4,5)
matrix( [1,     1,      1,      1,      1],
        [1,     1,      1,      1,      1],
        [1,     1,      1,      1,      1],
        [1,     1,      1,      1,      1] )

Testing Inversion Speed

Environment

For both the Pyboard v1.1 and Pyboard v1.0 lite tests, no SD card was used. There were only 3 files onboard the flash storage: boot.py (factory state), main.py (as described below), and umatrix.py.

main.py consisted of the following lines:

from umatrix import *
from utime import ticks_us

def t(func, n):
        # returns the average time for n executions of func in milliseconds
        start = ticks_us()
        for i in range(n):
                _ = func()
        end = ticks_us()
        return ((end-start)/1000)/n

T = matrix([12, 62], [98, 21])  # 2x2
U = T**3        # 2x2 large coefficients

V = matrix([57, 45, 67], [77, 40, 93], [12, 76, 34])    # 3x3
W = V**3        #3x3 large coefficients

X = matrix([10, 49, 36, 54], [88, 61, 53, 20], [31, 42, 53, 64], [9, 75, 60, 75])       # 4x4
Y = X**3        # 4x4 large coefficients

Visualisation:

>>> T
matrix( [12,    62],
        [98,    21] )

>>> U
matrix( [275148,        428606],
        [677474,        337365] )

>>> V
matrix( [57,    45,     67],
        [77,    40,     93],
        [12,    76,     34] )

>>> W
matrix( [1280099,       1498022,        1732795],
        [1568078,       1786761,        2112958],
        [ 978772,       1245168,        1345452] )

>>> X
matrix( [10,    49,     36,     54],
        [88,    61,     53,     20],
        [31,    42,     53,     64],
        [ 9,    75,     60,     75] )

>>> Y
matrix( [1177869,       1777147,        1597682,        1614846],
        [1535988,       2364798,        2117353,        2152054],
        [1445741,       2205124,        1984654,        2000664],
        [1724826,       2616789,        2351580,        2386851] )

Execution

The timing function t was called in the REPL with n = 5000. The reported result is the slowest of 3 tests i.e. 3 executions of t(func, 5000).

Results

A reminder that the results are in milliseconds.

Pyboard v1.1

  • umatrix v1.1
Matrix Size Small Coefficients Large Coefficients
2x2 0.6740602 0.7213964
3x3 1.072958 1.573
4x4 1.734226 4.559215

Pyboard v1.0 lite

  • umatrix v1.1
Matrix Size Small Coefficients Large Coefficients
2x2 1.137326 1.217149
3x3 1.831495 2.671786
4x4 2.979418 7.701244

There is a clear increase in execution time for either tests as the matrix size and coefficients get larger.

About

A matrix library for the MicroPython language

License:MIT License


Languages

Language:Python 100.0%