Iva Babukova's repositories
api
The API for Cellenics, staying in between the UI and the backends (worker, pipeline)
aws-cdk
The AWS Cloud Development Kit is a framework for defining cloud infrastructure in code
BIG-bench
Beyond the Imitation Game collaborative benchmark for measuring and extrapolating the capabilities of language models
bio
The contents of my personal website
biomage-utils
A CLI package for managing Cellenics infrastructure and codebase.
grafana
The open and composable observability and data visualization platform. Visualize metrics, logs, and traces from multiple sources like Prometheus, Loki, Elasticsearch, InfluxDB, Postgres and many more.
iac
Cellenics Infrastructure as Code and GitOps repository.
inframock
A mocked local copy of the Cellenics AWS stack to ease local development and testing.
kubernetes
Production-Grade Container Scheduling and Management
metadata-schema
This repo is for the metadata schemas associated with the HCA
pipeline
The Cellenics pipeline project for dependency-managed work processing.
ui
Front-end for Cellenics
vitessce-python-tutorial
Notebooks for HuBMAP tutorial session (January 2023)
worker
k8s workers that execute Python code for experiments.