Isy89

LBF

GAN-in-Chemoinformatics

kedro

A Python framework for creating reproducible, maintainable and modular data science code.

pyranges

Performant Pythonic GenomicRanges

python-data-viz-workshop

A workshop on data visualization in Python with notebooks and exercises for following along.

Chemo-stuff

deep-rules

Ten Simple Rules for Deep Learning in Biology

fextract_cool_signal_name

Example of plugin for LBFextract. This plugin extracts the number of reads per interval provided in a BED file.

fextract_jsd_to_flanking

lbfextract plugin to calculate the JSD divergence between the fragment length distribution in the flanking regions and at each position around the center of the transcription binding site

GCparagon

commandline tool for fast computation and correction of GC biases in WGS DNA datasets from liquid biopsy samples taking the fragment length into account

pyrle

Numerical Run Length Encoding and Arithmetic in Cython

workshop-uncool-mlops