iqbal-lab-org

iqbal-lab-org

Geek Repo

Iqbal Lab at EMBL-EBI

Home Page:https://www.ebi.ac.uk/research/iqbal

Github PK Tool:Github PK Tool

iqbal-lab-org's repositories

simutator

Simulate mutations in genomes

Language:PythonLicense:MITStargazers:12Issues:3Issues:0
Language:PythonLicense:MITStargazers:6Issues:0Issues:0

tb-amr-benchmarking

Pipeline for benchmarking TB AMR callers

Language:PythonLicense:MITStargazers:6Issues:0Issues:0

ivcfmerge

A utility to merge a large number of VCF files incrementally

gdist

API for genetic distance and presence queries

Stargazers:2Issues:0Issues:0

tb-amr-benchmarking-paper

Code to generate publication figures and tables from output of tb-amr-benchmarking

Language:PythonLicense:MITStargazers:2Issues:3Issues:0

cryptic_tb_callable_mask

Tracking bed file of callable region of genome

License:MITStargazers:1Issues:0Issues:0
Language:Jupyter NotebookStargazers:0Issues:0Issues:0
Language:MakefileStargazers:0Issues:0Issues:0

clockwork_validate_spreadsheet

For validating spreadsheet used by clockwork to import data

Language:PythonLicense:MITStargazers:0Issues:0Issues:0
Language:PythonLicense:MITStargazers:0Issues:0Issues:0

prg

Population Reference Graph

Stargazers:0Issues:0Issues:0

singularity_preexec_test

Singularity preexec test script for EBI clusters

Language:ShellStargazers:0Issues:0Issues:0
Language:PythonLicense:MITStargazers:0Issues:0Issues:0
Language:PythonLicense:MITStargazers:0Issues:0Issues:0