OBIS

pyobis

OBIS Python client

PacMAN-pipeline

Bioinformatics pipeline for the analysis of amplicon sequencing data of eDNA samples from the PacMAN project

pyworms

Python client for the WoRMS REST service

manual

The OBIS manual

edna-tracker-data

GitHub action for transforming eDNA samples metadata from PlutoF

mof-viewer

mwhs-data-mobilization

Biodiversity data mobilization for marine World Heritage sites.

edna-dashboard

edna-reference-databases

edna-results

Processed eDNA Expeditions metabarcoding results

edna-analysis-climate

edna-expeditions

Technical documentation for the eDNA Expeditions project

edna-species-lists

edna-tracker

invertbase-feed

jupyterhub-deploy-docker

Reference deployment of JupyterHub with docker

mpaeu_map_platform

A platform for hosting SDM maps produced by OBIS

mpaeu_msdm

mpaeu_sdm

Habitat range maps for European marine species

obis-therm

Produces dataset of sea temperature matched to occurrence records

pacman-data-analysis

pacmandetections

resources

rs.obis.org

rspeedy

Species distribution summaries.

sampling-effort-depth

This repo contains script to generated hexagonal grids of sampling effort (number of OBIS records) by depth layer.

species-thermal-limits

Experimenting methods to estimate species thermal limits based on occurrence data

speciesgrids

speedy

Species distribution summaries.

speedy-maps

Mapbox GL JS visualization of speedy results