inzilico

Gennady Khvorykh's repositories

An R package to estimate the quality of imputation of genotypes.

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Scripts for tagSNP selection

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A pipeline to select the best K (number of clusters) for fastPHASE imputation and phasing.

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Scripts to automate the phasing with several tools

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The repo contains the scripts, data and other resources devoted to the solution of cap set problem.

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FASTA/FASTQ pre-processing programs

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The repo contains the scripts, data and other resources devoted to the application of determinant of LD matrix to partition the genome

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The scripts used for GWAS and ML analyses.

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The repo contains the scripts, data and other resources devoted to simulation of genotype-phenotype datasets.

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