inoue0426

awesome-computational-biology

Awesome list of computational biology.

drGAT

MolCRAFT

Implementation for paper "MolCRAFT: Structure-Based Drug Design in Continuous Parameter Space"

scVGAE

captum

Model interpretability and understanding for PyTorch

dca

Deep count autoencoder for denoising scRNA-seq data

deepimpute

An accurate and efficient deep learning method for single-cell RNA-seq data imputation

DGraphDTA

a novel DTA predition method using graph neural network

DrugBankParser

DrugCell

A visible neural network model for drug response prediction

Dual3DDTI

flash-attention

Fast and memory-efficient exact attention

gactions

github_actions_tst

inoue0426

jax_binder

latexdiffcite

latexdiffcite is a wrapper around latexdiff to make citations diff properly

MOFGCN

MRNGCN

Integrating multiple networks to identify cancer driver genes based on heterogeneous graph convolution with self-attention mechanism

obsedian

pairwise_kernel_using_jax

Paper-reading

pbinder

PyG

python_template

rcellminerPubchem

rlipp

rpy2_binder

scBiGCN

scVGAE-paper

single cell RNA imputation methods using Graph Variational Auto Encoder.