Convert SWC file format to a 3D volume in multi-page tiff format.
Build uins CMake
- Create and cd into a build directory
mkdir build cd build
- Condifure Cmake
cmake ..
- Build
make
Run the program
./SWC2Tiff <input image> <input swc> <output tiff>
argument | description |
---|---|
input image |
Path to the input image in tiff format. This is only used to get the shape of the volume. |
input swc |
Path to the input swc file desired to be converted into a binary volume. |
output tiff |
Path to the output binary volume (must end in .tiff or .tif to support multipage.) |