Anastasia Illarionova's repositories
GeneExpressionVisualization
Set of R functions to visualize gene and transcript expression
Language:RMIT000
Language:RMIT000
000
EWCE
Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.
Language:R000
long-read-assembly
De novo phased assembly from long reads
Language:NextflowMIT000
pipeline-structural-variation
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Language:PythonNOASSERTION000
GEAN
This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.
Language:C++MIT000
RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
Language:HTML000
GPL-3.0000
Language:RMIT000
hybrid-assembly
Pipeline for hybrid assembly using short and long reads.
Language:NextflowMIT000
CRISPResso
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
NOASSERTION000