Vivarium is a simulation framework written using standard scientific Python tools.
Vivarium requires Python 3.8-3.11 to run
You can install vivarium from PyPI with pip:
> pip install vivarium
or build it from source with
> git clone https://github.com/ihmeuw/vivarium.git
> cd vivarium
> conda create -n ENVIRONMENT_NAME python=3.11
> pip install -e .[dev]
This will make the vivarium library available to python and install a
command-line executable called simulate that you can use to verify your
installation with
> simulate test