Giters
The International Sample Genome Resource (IGSR) (igsr)

The International Sample Genome Resource (IGSR)

igsr

Geek Repo

This organisation supports the codebase for the IGSR which is providing on going support for the 1000 Genomes project

Location:United Kingdom

Home Page:http://www.1000genomes.org

Github PK Tool:Github PK Tool

The International Sample Genome Resource (IGSR)'s repositories

1000Genomes_data_indexes

The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource

License:Apache-2.0Stargazers:42Issues:15Issues:1

igsr_analysis

This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:4Issues:8Issues:3

gca_1000genomes_website

The 1000genomes website

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igsr-code

This code is to support the day to day running of IGSR supporting the 1000 Genomes data

Language:PerlLicense:Apache-2.0Stargazers:1Issues:7Issues:0

igsr_archive

Contains code to perform several operations involving files in the IGSR (1000 genomes) FTP archive

Language:PythonLicense:Apache-2.0Stargazers:1Issues:5Issues:0

gca_elasticsearch

Tools for elasticsearch

Language:PerlLicense:Apache-2.0Stargazers:0Issues:1Issues:0

gca_elasticsearch_tools

Tools for elasticsearch

Language:PerlLicense:Apache-2.0Stargazers:0Issues:0Issues:0

gca_website_updater

Web server for pulling from github and updating our static content websites

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gtex-pipeline

GTEx & TOPMed data production and analysis pipelines

Language:PythonLicense:BSD-3-ClauseStargazers:0Issues:4Issues:0

igsr.github.io

The Static website content for the International Genome Sample Resource

Language:HTMLLicense:Apache-2.0Stargazers:0Issues:11Issues:0