Meng's repositories
docker_ucsc_genome_browser
UCSC Genome Browser Docker Image
libsvm_cuda
GPU accelerated libSVM grid search
pblat-cluster
blat with cluster parallel hybrid computing support
eccDNA_RCA_nanopore
eccDNA identification from nanopore long reads of rolling-circle amplicon
docker_ucsc_genome_browser_db
UCSC Genome Browser MySQL Database Docker Image
kubernetes-in-docker
Using docker containers to compose a local multi-node kubernetes cluster with docker in docker
biocommons.seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
bioconda-recipes
Conda recipes for the bioconda channel.
deepTools
Tools to process and analyze deep sequencing data.
e1071_parallel
Parallelized svm cross-validation in e1071 R package
easyC
An end to end HiC processing pipeline from raw sequencing reads to contact metrics
libsvm_cv_parallel
Extend the libSVM with parallelized svm cross-validation
rstudio_server_docker
Rstudio server in docker
SNPsplit
Allele-specific alignment sorting
spp
SPP - R package for analysis of ChIP-seq and other functional sequencing data