icaoberg's repositories
murphylab139
S.-C. Chen, T. Zhao, G. J. Gordon, and R. F. Murphy (2007). Automated Image Analysis of Protein Localization in Budding Yeast. Bioinformatics 23:i66-i71.
pyslid-docs
Sphinx documentation for pyslid
barrio_latino
Just a simple script that records the stream of Barrio Latino
bedtools2
A powerful toolset for genome arithmetic.
contentdb-tests
A simple package that performs calculations to answer some questions related to using content databases
fday
Fday is an open source coming soon page template, just clean & elegant.
latex-resume
A resume document style for XeLaTeX
libsvm
Clone of libsvm that includes compiled binaries and mex files.
meetup
Generates flyer for Meetups
murphylab186
The software needed to recreate the tables and figures for the article: B.H. Cho, I. Cao-Berg, J.A. Bakal, and R.F. Murphy (2012) OMERO.searcher: Content-based image search for microscope images. Nature Methods 9:633-634.
omero-example-scripts
Plugins for OMERO
omero-features
OMERO.features
ometiff
Scripts that convert some of the Murphy lab public raw image collections into OME-tiffs.
pelican-flickrtag
Display Flickr images easily in your Pelican articles.
pyslic-tutorial
A set of scripts that will show how to use PySLIC to calculate features
ricerca-docs
Sphinx documentation for ricerca.
speedometer
Chart network TX/RX and file download rates on the console
useful_scripts
My collection of useful scripts that I constantly use
waldo
Waldo Project