icansleep22hours's repositories
scGPT_2023.12fork
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scRNAseq_Benchmark
A comparison of automatic cell identification methods for single-cell RNA sequencing data
Bis
Code and materials to support data analyses and reproduce results from the paper "Distribution-agnostic Deep Learning Enables Accurate Single‐Cell Data Recovery and Transcriptional Regulation Interpretation".
cell2sentence-ft
Cell2Sentence turns scRNA-seq data into text for LLM training.
CytoTree-dataset
Datasets and code for CytoTree
deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
enformer-pytorch
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
huatuo
2023.11.27
MetaCyto_Examples
Examples for MetaCyto
sc-type
20240419备份
Single-cell-analysis-flow-cytometry
To reveal the cellular heterogeneity within flow cytometry data, clustering and pseudotime analysis can be performed. Here, we demonstrate how to import (clustered) data, how to apply clustering and dimensionality reduction, and how to apply pseudotime analysis by Slingshot.
wishbone
Wishbone is an algorithm to align cells along developmental trajectories with branches