iBrain-007's repositories
ArteryNetwork
A pipeline to extract vessels from MR images and perform analysis.
awesome-transformers-in-medical-imaging
A collection of resources on applications of Transformers in Medical Imaging.
eyepy
A python package to read, analyse and visualize OCT and fundus data form various sources.
global-local-transformer
Global-local Transformer for brain age prediction
iBrain-007.github.io
A minimal and beautiful Jekyll theme best for writing and note-taking.
ITKThickness3D
An ITK module to compute 3D thickness
pytorch-cnn-visualizations
Pytorch implementation of convolutional neural network visualization techniques
pyvane
Python Vascular Network Analysis
SSL4MIS
Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.
surface-distance
Library to compute surface distance based performance metrics for segmentation tasks.
uncertainty-toolbox
A python toolbox for predictive uncertainty quantification, calibration, metrics, and visualization
voxel2mesh
Voxel2Mesh: 3D Mesh Model Generation from Volumetric Data