i-Zaak / tvb-hpc

Code generation for TVB

TVB-HPC

This is a Python package for generating code for parameter sweeps and Bayesian inversion.

Getting started

Set up environment

Get the code and make a env to work in

git clone --recursive https://github.com/the-virtual-brain/tvb-hpc
PREFIX=$(pwd)/venv tvb-hpc/env/make-env.sh
source venv/activate

Be sure your git clone is recursive, otherwise some dependencies will not be correctly obtained.

Code

See our examples and test suite (tvb_hpc/tests.py) to get a feel for what's implemented.