Lim Lab @ CCHMC's repositories
bwtool
A tool for bigWig files.
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EChO_LimLab
Enhanced Chromatin Occupancy (EChO)
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ega-download-client
A Python-based EGA download client
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kent
UCSC Genome Browser source tree. Stable branch: "beta".
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libbeato
Library combining some HTS stuff, core wiggle stuff, Jim Kent's libary.
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NucleoATAC_LimLab
nucleosome calling using ATAC-seq
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SEACR_LimLab
SEACR: Sparse Enrichment Analysis for CUT&RUN
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tutorial
Various tutorials on how to analyse transcriptomic data.
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Vennerable
Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries. It allows the display of area-weighted Venn diagrams and allows fine graphical control over the result.
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