hwanython / HanSeg_2023

Contribution to the Grand Challenge (MICCAI 2023)

DMX Solution to HaNSeg

Overview

This repository contains scripts and tools for building a Docker algorithm, performing prediction on a test dataset, and calculating DSC (Dice Similarity Coefficient). Below are the steps to execute each of these tasks.

Prerequisites

Make sure you have the following installed:

• Docker
• Python 3.9
• Necessary Python packages (can be installed using requirements.txt if provided)

Steps

1. Build the Docker Algorithm

To build the Docker algorithm, run the following command in your terminal:

sh test.sh

2. Prediction on Test Dataset

To perform predictions on the test dataset, execute the following command:

python3 process.py

3. DSC Calculation

To calculate the Dice Similarity Coefficient (DSC), use the following command:

python3 calc_dice.py

Contact

Email: [e-mail]