huxiaoti

GI-cutscenes

A command line program playing with the cutscenes files (USM) from Genshin Impact.

SpatialPCA

Spatially aware dimension reduction for spatial transcriptomics.

DINO

[ICLR 2023] Official implementation of the paper "DINO: DETR with Improved DeNoising Anchor Boxes for End-to-End Object Detection"

detr

End-to-End Object Detection with Transformers

EMT_score_calculation

METABRIC

SARS-CoV-2_metab

CellTrek

L1000-bayesian

L1000 peak deconvolution based on Bayesian analysis

pygcn

Graph Convolutional Networks in PyTorch

vit-pytorch

Implementation of Vision Transformer, a simple way to achieve SOTA in vision classification with only a single transformer encoder, in Pytorch

CoGO

CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure

UACANet

Official PyTorch implementation of UACANet: Uncertainty Augmented Context Attention for Polyp Segmentation (ACMMM 2021)

focal_loss_pytorch

A PyTorch Implementation of Focal Loss.

Focal-Loss-Pytorch

全中文注释.(The loss function of retinanet based on pytorch).(You can use it on one-stage detection task or classifical task, to solve data imbalance influence).用于one-stage目标检测算法,提升检测效果.你也可以在分类任务中使用该损失函数,解决数据不平衡问题.

EA-WGCN

A Weighted GCN with Logical Adjacency Matrix for Relation Extraction (ECAI2020)

bio_embeddings

Get protein embeddings from protein sequences

D-SCRIPT

A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions

python-louvain

Louvain Community Detection

relation-gcn-pytorch

pytorch implementaion of Relational Graph Convolutional Networks

RGCN-pytorch

Pytorch implementation of Relational GCN for node classification

RGCN

Pytorch implementation of a RGCN Link Prediction Model

Polyp-PVT

Polyp-PVT: Polyp Segmentation with Pyramid Vision Transformers, AIR 2023.

PVT

Official implementation of PVT series

graph_attention_pool

Attention over nodes in Graph Neural Networks using PyTorch (NeurIPS 2019)

attention-is-all-you-need-pytorch

A PyTorch implementation of the Transformer model in "Attention is All You Need".

DSOL_rv0.2

deep protein solubility prediction

deeptrio

graphvae_compress

Compressed Graph Representation for Scalable Molecular Graph Generation

pyGAT

Pytorch implementation of the Graph Attention Network model by Veličković et. al (2017, https://arxiv.org/abs/1710.10903)