Qiwen Hu's repositories

speciesTree

Tree based method for robust cross-species data integration

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HM_splicing

Random forest based approach for detecting regulatory histone marks associated with splicing patterns

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snarePip

Modules for snare-seq processing

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CellAnnotatoR

Automated marker-based annotation of cell types

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czi-hca-report

A repository that collects our findings from our efforts under the CZI/HCA project.

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czi-rfa

Application to "Collaborative Computational Tools for the Human Cell Atlas" https://chanzuckerberg.com/initiatives/rfa

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psb-manuscript

Manuscript source for the People of the Pacific Symposium on Biocomputing

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public-bioinformatics-datasets

Publicly available dataset for bioinformatics and integrative -omics research

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spPipline

spatial data (dartfish) processing and analysis

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