huangzhii

SALMON

SALMON: Survival Analysis Learning with Multi-Omics Neural Networks

nuclei.io

nuclei.io: Human-in-the-loop active learning framework for pathology image analysis

biolearns

BioLearns: Computational Biology and Bioinformatics Toolbox in Python

IMPRESS

TSUNAMI

An R software for Gene Co-Expression Analysis

lmQCM

R package lmQCM: An Algorithm for Gene Co-Expression Analysis

chatbot-ui

A ChatGPT clone for running locally in your browser.

AmIGrinding

AttentionDeepMIL

Implementation of Attention-based Deep Multiple Instance Learning in PyTorch

CoxNMF

DeepAttnMISL

Contains codes of DeepAttnMISL in MEDIA'20

GCML

Code for WACV 2022 paper "Generalized Clustering and Multi-Manifold Learning with Geometric Structure Preservation"

HistomicsTK

A Python toolkit for pathology image analysis algorithms.

Image2Paragraph

Transform Image into Unique Paragraph with ChatGPT, BLIP2, OFA, GRIT, Segment Anything, ControlNet.

IMPRESS-NAC

Huang et al. Artificial Intelligence Predicts Breast Cancer Neoadjuvant Chemotherapy Response from Multi-source Pathologic Images

isyntax2raw

iSyntax to raw format converter

LAVIS

LAVIS - A One-stop Library for Language-Vision Intelligence

MCAT

Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021

MedMNIST

MedMNIST Classification Decathlon: A Lightweight AutoML Benchmark for Medical Image Analysis

Mixed_supervision

MICCAI2022: Multiple Instance Learning with Mixed Supervision in Gleason Grading.

nuclei-HAI

nuclei.io_study_training_scripts

PathomicFusion

Fusing Histology and Genomics via Deep Learning - IEEE TMI

pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

PyContrast

PyTorch implementation of Contrastive Learning methods; List of awesome-contrastive-learning papers

RAD

self-driving-car

Udacity Self-Driving Car Engineer Nanodegree projects.

slidescape

TDC

Therapeutics Data Commons: Machine Learning Datasets for Therapeutics

TSUNAMI_Gateway