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Paul (hpbenton)

hpbenton

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Company:Vicinitas Theraputics

Location:San Francisco

Twitter:@pb_sci

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vicinitas-therapeutics

Paul's starred repositories

xcmsTutorials

Tutorials and workshops describing LC-MS(/MS) data pre-processing and analysis using the xcms Bioconductor package

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nicegui

Create web-based user interfaces with Python. The nice way.

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msconvert_api

A simple API (fastAPI) for running msconvert.

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scidataflow

Command line scientific data management tool

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ms-interactive-viz

Customizable and informative mass spectra with Bokeh

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MetaboAnalystR

R package for MetaboAnalyst

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stat_rethinking_2023

Statistical Rethinking Course for Jan-Mar 2023

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shinygam

R Shiny web-app for integrated metabolic network analysis

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cpc

The purpose of the cpc package is primarily to characterize the peaks detected using a separate peak detection method. Currently the only supported preprocessing software is XCMS.

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scispacy

A full spaCy pipeline and models for scientific/biomedical documents.

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hacking-resources

Hacking resources and cheat sheets. References, tools, scripts, tutorials, and other resources that help offensive and defensive security professionals.

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xcms

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

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