housw

Shengwei Hou's repositories

Bioinfo-Dockerfiles

Source dockerfiles for common bioinformatic tools.

Language:DockerfileGPL-3.02 30

GRPutils

Utilities to manipulate Artemis compatible coverage graphs and to process dRNA-Seq data for TSS prediction

Language:PythonGPL-3.01 30

MAGstats-binder

Language:Jupyter NotebookBSD-3-Clause1 30

515Y926R_Demul

simple barcode spliter for 515F/926R amplified amplicon sequencing data

Language:Python030

An-Introduction-To-Applied-Bioinformatics

Interactive lessons in bioinformatics.

Language:PythonNOASSERTION030

bayesian_cbiomes

notebooks and files for the Bayesian CBIOMES workshop

Language:Jupyter Notebook020

BinSanity

Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation

Language:PythonGPL-3.0030

housw.github.io

my personal website

Language:CSSMIT030

phyloutils

Scripts for phylogenetic and phylogenomic analysis

Language:PythonGPL-3.0030

scripts

quick and dirty scripts for microbial genomic and transcriptomic data analysis

Language:PythonGPL-3.0030

Bioinfo-Singularity

Language:Shell020

biokit

Bioinformatics in Python

Language:Jupyter NotebookBSD-2-Clause030

BlendIt

Language:PythonNOASSERTION020

conda_envs

Language:ShellGPL-3.0030

Database

Language:ShellGPL-3.0030

eukrhythmic

A metatranscriptomic pipeline for optimized for analyzing transcriptomes of eukaryotes.

Language:PythonMIT020

EUKulele

Automatic eukaryotic taxonomic classification

Language:Jupyter Notebook020

geneD3

Sequence Comparisons D3

Language:HTMLGPL-3.0030

GLASSgo_postprocessing

Language:HTMLApache-2.0030

gRodon

Language:R010

JuliaBoxTutorials

Language:Jupyter Notebook010

mdRNA-Seq

Scripts for metatranscriptional dRNA-Seq (mdRNA-Seq)

Language:Python030

notes-python

中文 Python 笔记

Language:Jupyter Notebook030

readcounter

Language:HTMLMIT03 1

Vahine

Language:Python030