hlowman / Metabolism_Workflows

Stream and lake metabolism workflows in the Blaszczak Lab

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Metabolism_Workflows

Stream and lake metabolism workflows in the Blaszczak Lab

Core workflow + accompanying scripts:

(1) Baseflow/event detection script (discharge)

Raw scripts: (LK)

(2) Light data assembly script

Raw scripts: 20220825_DL_NLDAS.R, 20220825_NLDAS_proc.R (LK)

(3) Barometric pressure data assembly script

Raw scripts: 20221212_DL_GLDAS_pressure.R, 20221212_GLDAS_proc.R, 20221212 Split_Interp_BaroData_2.R (LK)

(4) Dissolved oxygen tidying script

Raw scripts: (KL)

(5) Full dataset assembly script

(6) streamMetabolizer run script

(7) Model diagnostics script

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Stream and lake metabolism workflows in the Blaszczak Lab


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